IL_6ZM5_095
3D structure
- PDB id
- 6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- CCG*CAUG
- Length
- 7 nucleotides
- Bulged bases
- 6ZM5|1|AA|C|1484, 6ZM5|1|AA|U|1568
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZM5_095 not in the Motif Atlas
- Geometric match to IL_4V88_463
- Geometric discrepancy: 0.0902
- The information below is about IL_4V88_463
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61438.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
6ZM5|1|AA|C|1483
6ZM5|1|AA|C|1484
6ZM5|1|AA|G|1485
*
6ZM5|1|AA|C|1566
6ZM5|1|AA|A|1567
6ZM5|1|AA|U|1568
6ZM5|1|AA|G|1569
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain A3
- Aurora kinase A-interacting protein
- Chain x
- Transfer RNA; tRNA
- Chain y
- mRNA
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