IL_6ZQB_018
3D structure
- PDB id
- 6ZQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state B2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CC*GUG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZQB_018 not in the Motif Atlas
- Geometric match to IL_1NTA_001
- Geometric discrepancy: 0.2102
- The information below is about IL_1NTA_001
- Detailed Annotation
- Stack outside cWW
- Broad Annotation
- Stack outside cWW
- Motif group
- IL_66635.5
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 27
Unit IDs
6ZQB|1|D2|C|355
6ZQB|1|D2|C|356
*
6ZQB|1|D2|G|369
6ZQB|1|D2|U|370
6ZQB|1|D2|G|371
Current chains
- Chain D2
- 5ETS RNA
Nearby chains
- Chain UG
- U3 small nucleolar RNA-associated protein 7
Coloring options: