IL_6ZSC_051

3D structure

PDB id

6ZSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CCU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZSC_051 not in the Motif Atlas

Geometric match to IL_5J7L_257

Geometric discrepancy: 0.1127

The information below is about IL_5J7L_257

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_07785.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

6ZSC|1|XA|C|1845
6ZSC|1|XA|C|1846
6ZSC|1|XA|U|1847
*
6ZSC|1|XA|A|1856
6ZSC|1|XA|U|1857
6ZSC|1|XA|G|1858

Current chains

Chain XA

16S rRNA

Nearby chains

Chain 0

39S ribosomal protein L32, mitochondrial

Chain XF

39S ribosomal protein L4, mitochondrial

Chain XM

39S ribosomal protein L15, mitochondrial

Chain XR

39S ribosomal protein L20, mitochondrial

Chain XS

39S ribosomal protein L21, mitochondrial