IL_6ZSC_099

3D structure

PDB id

6ZSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CCUAC*GCG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZSC_099 not in the Motif Atlas

Geometric match to IL_6JDV_004

Geometric discrepancy: 0.2258

The information below is about IL_6JDV_004

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.12

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

22

Unit IDs

6ZSC|1|XA|C|3148
6ZSC|1|XA|C|3149
6ZSC|1|XA|U|3150
6ZSC|1|XA|A|3151
6ZSC|1|XA|C|3152
*
6ZSC|1|XA|G|3161
6ZSC|1|XA|C|3162
6ZSC|1|XA|G|3163

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XE

39S ribosomal protein L3, mitochondrial

Chain XL

39S ribosomal protein L14, mitochondrial

Chain XQ

39S ribosomal protein L19, mitochondrial