IL_6ZTL_169

3D structure

PDB id

6ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state bound to NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UCACU*AAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTL_169 not in the Motif Atlas

Homologous match to IL_5J7L_347

Geometric discrepancy: 0.1371

The information below is about IL_5J7L_347

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.11

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

19

Unit IDs

6ZTL|1|BA|U|2680
6ZTL|1|BA|C|2681
6ZTL|1|BA|A|2682
6ZTL|1|BA|C|2683
6ZTL|1|BA|U|2684
*
6ZTL|1|BA|A|2725
6ZTL|1|BA|A|2726
6ZTL|1|BA|A|2727

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BD

50S ribosomal protein L3

Chain BL

50S ribosomal protein L14

Chain BO

50S ribosomal protein L17

Chain BQ

50S ribosomal protein L19