IL_6ZU5_004
3D structure
- PDB id
- 6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Paranosema locustae ribosome in complex with Lso2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- ACGAU*ACACGACU
- Length
- 13 nucleotides
- Bulged bases
- 6ZU5|1|L50|C|83
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZU5_004 not in the Motif Atlas
- Geometric match to IL_5G4U_006
- Geometric discrepancy: 0.1874
- The information below is about IL_5G4U_006
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_69229.2
- Basepair signature
- cWW-tHS-tSH-tSS-cWW-cWW-cWW-L
- Number of instances in this motif group
- 11
Unit IDs
6ZU5|1|L50|A|69
6ZU5|1|L50|C|70
6ZU5|1|L50|G|71
6ZU5|1|L50|A|72
6ZU5|1|L50|U|73
*
6ZU5|1|L50|A|80
6ZU5|1|L50|C|81
6ZU5|1|L50|A|82
6ZU5|1|L50|C|83
6ZU5|1|L50|G|84
6ZU5|1|L50|A|85
6ZU5|1|L50|C|86
6ZU5|1|L50|U|87
Current chains
- Chain L50
- 25S rRNA
Nearby chains
- Chain LHH
- uL29
- Chain LY0
- uL24
Coloring options: