IL_6ZU5_007

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGCAGUAG*CGAACAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_007 not in the Motif Atlas

Homologous match to IL_8C3A_006

Geometric discrepancy: 0.1379

The information below is about IL_8C3A_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_88613.1

Basepair signature

cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

2

Unit IDs

6ZU5|1|L50|U|176
6ZU5|1|L50|G|177
6ZU5|1|L50|C|178
6ZU5|1|L50|A|179
6ZU5|1|L50|G|180
6ZU5|1|L50|U|181
6ZU5|1|L50|A|182
6ZU5|1|L50|G|183
*
6ZU5|1|L50|C|191
6ZU5|1|L50|G|192
6ZU5|1|L50|A|193
6ZU5|1|L50|A|194
6ZU5|1|L50|C|195
6ZU5|1|L50|A|196
6ZU5|1|L50|G|197

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LAA

uL15

Chain LL0

eL13

Chain LN0

eL15

Chain LQ0

eL18