IL_6ZU5_023
3D structure
- PDB id
- 6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Paranosema locustae ribosome in complex with Lso2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGUAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZU5_023 not in the Motif Atlas
- Geometric match to IL_4V9F_033
- Geometric discrepancy: 0.1107
- The information below is about IL_4V9F_033
- Detailed Annotation
- 5x5 Sarcin-Ricin with intercalated A; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_38862.5
- Basepair signature
- cWW-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
6ZU5|1|L50|C|745
6ZU5|1|L50|G|746
6ZU5|1|L50|U|747
6ZU5|1|L50|A|748
6ZU5|1|L50|G|749
*
6ZU5|1|L50|C|794
6ZU5|1|L50|G|795
6ZU5|1|L50|A|796
6ZU5|1|L50|A|797
6ZU5|1|L50|G|798
Current chains
- Chain L50
- 25S rRNA
Nearby chains
- Chain L70
- 5S ribosomal RNA; 5S rRNA
- Chain LF0
- uL30
- Chain LI0
- uL16
- Chain LS0
- eL20
- Chain LT0
- eL21
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