IL_6ZU5_025
3D structure
- PDB id
- 6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Paranosema locustae ribosome in complex with Lso2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCAAU*AAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZU5_025 not in the Motif Atlas
- Homologous match to IL_5TBW_040
- Geometric discrepancy: 0.1276
- The information below is about IL_5TBW_040
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_02509.3
- Basepair signature
- cWW-cWS-cWW-cWW-R-cSH-tWH-R
- Number of instances in this motif group
- 6
Unit IDs
6ZU5|1|L50|G|751
6ZU5|1|L50|C|752
6ZU5|1|L50|A|753
6ZU5|1|L50|A|754
6ZU5|1|L50|U|755
*
6ZU5|1|L50|A|788
6ZU5|1|L50|A|789
6ZU5|1|L50|A|790
6ZU5|1|L50|C|791
Current chains
- Chain L50
- 25S rRNA
Nearby chains
- Chain L70
- 5S ribosomal RNA; 5S rRNA
- Chain LD0
- uL18
- Chain LI0
- uL16
- Chain LT0
- eL21
Coloring options: