IL_6ZU5_034
3D structure
- PDB id
- 6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Paranosema locustae ribosome in complex with Lso2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GACGAAG*CGAAAAUGGACGGUGC
- Length
- 23 nucleotides
- Bulged bases
- 6ZU5|1|L50|A|1029
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZU5_034 not in the Motif Atlas
- Geometric match to IL_7RQB_040
- Geometric discrepancy: 0.2666
- The information below is about IL_7RQB_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50715.1
- Basepair signature
- cWW-tSH-tHH-L-R-L-R-L-tWW-L-cWW-L-L-L-R-L
- Number of instances in this motif group
- 4
Unit IDs
6ZU5|1|L50|G|926
6ZU5|1|L50|A|927
6ZU5|1|L50|C|928
6ZU5|1|L50|G|929
6ZU5|1|L50|A|930
6ZU5|1|L50|A|931
6ZU5|1|L50|G|932
*
6ZU5|1|L50|C|1026
6ZU5|1|L50|G|1027
6ZU5|1|L50|A|1028
6ZU5|1|L50|A|1029
6ZU5|1|L50|A|1030
6ZU5|1|L50|A|1031
6ZU5|1|L50|U|1032
6ZU5|1|L50|G|1033
6ZU5|1|L50|G|1034
6ZU5|1|L50|A|1035
6ZU5|1|L50|C|1036
6ZU5|1|L50|G|1037
6ZU5|1|L50|G|1038
6ZU5|1|L50|U|1039
6ZU5|1|L50|G|1040
6ZU5|1|L50|C|1041
Current chains
- Chain L50
- 25S rRNA
Nearby chains
- Chain L70
- 5S ribosomal RNA; 5S rRNA
- Chain LB0
- uL3
- Chain LFF
- eL33
- Chain LI0
- uL16
- Chain LMM
- eL40
- Chain LO0
- uL13
- Chain LS0
- eL20
Coloring options: