IL_6ZU5_054

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUUCGG*CUGU

Length

10 nucleotides

Bulged bases

6ZU5|1|L50|G|1804

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_054 not in the Motif Atlas

Homologous match to IL_8C3A_083

Geometric discrepancy: 0.0888

The information below is about IL_8C3A_083

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_06455.1

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

7

Unit IDs

6ZU5|1|L50|A|1538
6ZU5|1|L50|U|1539
6ZU5|1|L50|U|1540
6ZU5|1|L50|C|1541
6ZU5|1|L50|G|1542
6ZU5|1|L50|G|1543
*
6ZU5|1|L50|C|1802
6ZU5|1|L50|U|1803
6ZU5|1|L50|G|1804
6ZU5|1|L50|U|1805

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LB0

uL3

Chain LV0

uL14