IL_6ZU5_079

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUC*GUGAG

Length

8 nucleotides

Bulged bases

6ZU5|1|L50|G|2336, 6ZU5|1|L50|A|2337

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_079 not in the Motif Atlas

Geometric match to IL_5TBW_108

Geometric discrepancy: 0.0948

The information below is about IL_5TBW_108

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_54650.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

16

Unit IDs

6ZU5|1|L50|C|2270
6ZU5|1|L50|U|2271
6ZU5|1|L50|C|2272
*
6ZU5|1|L50|G|2334
6ZU5|1|L50|U|2335
6ZU5|1|L50|G|2336
6ZU5|1|L50|A|2337
6ZU5|1|L50|G|2338

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LB0

uL3

Chain LV0

uL14