IL_6ZU5_086

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCGCU*ACG

Length

8 nucleotides

Bulged bases

6ZU5|1|L50|C|2477

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_086 not in the Motif Atlas

Geometric match to IL_7RQB_104

Geometric discrepancy: 0.0978

The information below is about IL_7RQB_104

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.6

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

14

Unit IDs

6ZU5|1|L50|C|2436
6ZU5|1|L50|C|2437
6ZU5|1|L50|G|2438
6ZU5|1|L50|C|2439
6ZU5|1|L50|U|2440
*
6ZU5|1|L50|A|2476
6ZU5|1|L50|C|2477
6ZU5|1|L50|G|2478

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LB0

uL3

Chain LV0

uL14

Chain LW0

eL24