IL_6ZU5_091

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGUGCG*CUGAG

Length

11 nucleotides

Bulged bases

6ZU5|1|L50|G|2613

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_091 not in the Motif Atlas

Homologous match to IL_8C3A_139

Geometric discrepancy: 0.0784

The information below is about IL_8C3A_139

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_83162.8

Basepair signature

cWW-cWW-tSH-cWW-tHH-L

Number of instances in this motif group

4

Unit IDs

6ZU5|1|L50|U|2585
6ZU5|1|L50|G|2586
6ZU5|1|L50|U|2587
6ZU5|1|L50|G|2588
6ZU5|1|L50|C|2589
6ZU5|1|L50|G|2590
*
6ZU5|1|L50|C|2611
6ZU5|1|L50|U|2612
6ZU5|1|L50|G|2613
6ZU5|1|L50|A|2614
6ZU5|1|L50|G|2615

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LB0

uL3

Chain LDD

eL31

Chain LW0

eL24