IL_6ZU5_092

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAG*CGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_092 not in the Motif Atlas

Homologous match to IL_8C3A_141

Geometric discrepancy: 0.3071

The information below is about IL_8C3A_141

Detailed Annotation

Double sheared; A in syn

Broad Annotation

Double sheared

Motif group

IL_09705.12

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

35

Unit IDs

6ZU5|1|L50|C|2595
6ZU5|1|L50|G|2596
6ZU5|1|L50|A|2597
6ZU5|1|L50|G|2598
*
6ZU5|1|L50|C|2604
6ZU5|1|L50|G|2605
6ZU5|1|L50|A|2606
6ZU5|1|L50|G|2607

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LR0

eL19

Chain LU0

eL22

Chain SI0

eS8