IL_6ZU5_097
3D structure
- PDB id
- 6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Paranosema locustae ribosome in complex with Lso2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGGAGUAC*GGAAAUG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZU5_097 not in the Motif Atlas
- Geometric match to IL_7A0S_007
- Geometric discrepancy: 0.1531
- The information below is about IL_7A0S_007
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.3
- Basepair signature
- cWW-cWW-tSH-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
6ZU5|1|L70|U|71
6ZU5|1|L70|G|72
6ZU5|1|L70|G|73
6ZU5|1|L70|A|74
6ZU5|1|L70|G|75
6ZU5|1|L70|U|76
6ZU5|1|L70|A|77
6ZU5|1|L70|C|78
*
6ZU5|1|L70|G|98
6ZU5|1|L70|G|99
6ZU5|1|L70|A|100
6ZU5|1|L70|A|101
6ZU5|1|L70|A|102
6ZU5|1|L70|U|103
6ZU5|1|L70|G|104
Current chains
- Chain L70
- 5S rRNA
Nearby chains
- Chain L50
- Large subunit ribosomal RNA; LSU rRNA
- Chain LD0
- uL18
- Chain LF0
- uL30
- Chain LI0
- uL16
- Chain LS0
- eL20
Coloring options: