IL_6ZU9_040
3D structure
- PDB id
- 6ZU9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast ABCE1-bound 48S initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.2 Å
Loop
- Sequence
- GAAAAAAUU*AUAUUAGC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZU9_040 not in the Motif Atlas
- Homologous match to IL_4V88_425
- Geometric discrepancy: 0.3091
- The information below is about IL_4V88_425
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_53064.1
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6ZU9|1|2|G|751
6ZU9|1|2|A|752
6ZU9|1|2|A|753
6ZU9|1|2|A|754
6ZU9|1|2|A|755
6ZU9|1|2|A|756
6ZU9|1|2|A|757
6ZU9|1|2|U|758
6ZU9|1|2|U|759
*
6ZU9|1|2|A|791
6ZU9|1|2|U|792
6ZU9|1|2|A|793
6ZU9|1|2|U|794
6ZU9|1|2|U|795
6ZU9|1|2|A|796
6ZU9|1|2|G|797
6ZU9|1|2|C|798
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain S
- 40S ribosomal protein S4-A
- Chain W
- 40S ribosomal protein S9-A
- Chain X
- 40S ribosomal protein S11-A
Coloring options: