IL_6ZU9_091

3D structure

PDB id

6ZU9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a yeast ABCE1-bound 48S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

6.2 Å

Loop

Sequence

UAG*CAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU9_091 not in the Motif Atlas

Homologous match to IL_4V88_476

Geometric discrepancy: 0.5081

The information below is about IL_4V88_476

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_30342.2

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

10

Unit IDs

6ZU9|1|2|U|1688
6ZU9|1|2|A|1689
6ZU9|1|2|G|1690
*
6ZU9|1|2|C|1711
6ZU9|1|2|A|1712
6ZU9|1|2|G|1713

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain T

40S ribosomal protein S6-A