IL_6ZU9_095
3D structure
- PDB id
- 6ZU9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast ABCE1-bound 48S initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.2 Å
Loop
- Sequence
- UUGUCAG*CUUGGAUUUA
- Length
- 17 nucleotides
- Bulged bases
- 6ZU9|1|2|G|913
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZU9_095 not in the Motif Atlas
- Homologous match to IL_8P9A_422
- Geometric discrepancy: 0.2917
- The information below is about IL_8P9A_422
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_57741.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
6ZU9|1|2|U|893
6ZU9|1|2|U|894
6ZU9|1|2|G|895
6ZU9|1|2|U|896
6ZU9|1|2|C|897
6ZU9|1|2|A|898
6ZU9|1|2|G|899
*
6ZU9|1|2|C|910
6ZU9|1|2|U|911
6ZU9|1|2|U|912
6ZU9|1|2|G|913
6ZU9|1|2|G|914
6ZU9|1|2|A|915
6ZU9|1|2|U|916
6ZU9|1|2|U|917
6ZU9|1|2|U|918
6ZU9|1|2|A|919
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain Q
- 40S ribosomal protein S1-A
- Chain Z
- 40S ribosomal protein S14-A
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