3D structure

PDB id
6ZVI (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mbf1-ribosome complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
UGU*AGA
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6ZVI_013 not in the Motif Atlas
Geometric match to IL_6RA4_002
Geometric discrepancy: 0.1124
The information below is about IL_6RA4_002
Detailed Annotation
Isolated cWH basepair
Broad Annotation
No text annotation
Motif group
IL_10167.6
Basepair signature
cWW-cHW-cWW
Number of instances in this motif group
51

Unit IDs

6ZVI|1|h|U|150
6ZVI|1|h|G|151
6ZVI|1|h|U|152
*
6ZVI|1|h|A|162
6ZVI|1|h|G|163
6ZVI|1|h|A|164

Current chains

Chain h
18S rRNA

Nearby chains

Chain I
40S ribosomal protein S24-A
Chain o
40S ribosomal protein S6-A

Coloring options:


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