IL_6ZVI_044
3D structure
- PDB id
- 6ZVI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mbf1-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAAAAAAUU*AUAUUAGC
- Length
- 17 nucleotides
- Bulged bases
- 6ZVI|1|h|U|794
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZVI_044 not in the Motif Atlas
- Homologous match to IL_4V88_425
- Geometric discrepancy: 0.2285
- The information below is about IL_4V88_425
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_53064.1
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6ZVI|1|h|G|751
6ZVI|1|h|A|752
6ZVI|1|h|A|753
6ZVI|1|h|A|754
6ZVI|1|h|A|755
6ZVI|1|h|A|756
6ZVI|1|h|A|757
6ZVI|1|h|U|758
6ZVI|1|h|U|759
*
6ZVI|1|h|A|791
6ZVI|1|h|U|792
6ZVI|1|h|A|793
6ZVI|1|h|U|794
6ZVI|1|h|U|795
6ZVI|1|h|A|796
6ZVI|1|h|G|797
6ZVI|1|h|C|798
Current chains
- Chain h
- 18S rRNA
Nearby chains
- Chain E
- RPS22A isoform 1
- Chain m
- 40S ribosomal protein S4-A
- Chain r
- 40S ribosomal protein S9-A
- Chain t
- 40S ribosomal protein S11-A
Coloring options: