IL_6ZVI_075
3D structure
- PDB id
- 6ZVI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mbf1-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GCCAGCGA*UUGUGAAAC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZVI_075 not in the Motif Atlas
- Homologous match to IL_4V88_459
- Geometric discrepancy: 0.0738
- The information below is about IL_4V88_459
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_10447.1
- Basepair signature
- cWW-tWW-L-R-L-R-L-R-L-tHW-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6ZVI|1|h|G|1480
6ZVI|1|h|C|1481
6ZVI|1|h|C|1482
6ZVI|1|h|A|1483
6ZVI|1|h|G|1484
6ZVI|1|h|C|1485
6ZVI|1|h|G|1486
6ZVI|1|h|A|1487
*
6ZVI|1|h|U|1519
6ZVI|1|h|U|1520
6ZVI|1|h|G|1521
6ZVI|1|h|U|1522
6ZVI|1|h|G|1523
6ZVI|1|h|A|1524
6ZVI|1|h|A|1525
6ZVI|1|h|A|1526
6ZVI|1|h|C|1527
Current chains
- Chain h
- 18S rRNA
Nearby chains
- Chain B
- 40S ribosomal protein S19-A
- Chain C
- RPS20 isoform 1
- Chain O
- RPS29A isoform 1
- Chain l
- RPS3 isoform 1
- Chain n
- Rps5p
- Chain y
- 40S ribosomal protein S16-A
Coloring options: