IL_6ZVI_087
3D structure
- PDB id
- 6ZVI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mbf1-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AGGAU*AGAAU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZVI_087 not in the Motif Atlas
- Homologous match to IL_4V88_474
- Geometric discrepancy: 0.1453
- The information below is about IL_4V88_474
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_95716.2
- Basepair signature
- cWW-cWW-tHS-tHS-tSH-cWW
- Number of instances in this motif group
- 18
Unit IDs
6ZVI|1|h|A|1678
6ZVI|1|h|G|1679
6ZVI|1|h|G|1680
6ZVI|1|h|A|1681
6ZVI|1|h|U|1682
*
6ZVI|1|h|A|1719
6ZVI|1|h|G|1720
6ZVI|1|h|A|1721
6ZVI|1|h|A|1722
6ZVI|1|h|U|1723
Current chains
- Chain h
- 18S rRNA
Nearby chains
- Chain o
- 40S ribosomal protein S6-A
- Chain q
- 40S ribosomal protein S8-A
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