IL_6ZXE_033
3D structure
- PDB id
- 6ZXE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a late human pre-40S ribosomal subunit - State F2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UCCA*UUAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZXE_033 not in the Motif Atlas
- Geometric match to IL_5AOX_003
- Geometric discrepancy: 0.3293
- The information below is about IL_5AOX_003
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.2
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 43
Unit IDs
6ZXE|1|2|U|566
6ZXE|1|2|C|567
6ZXE|1|2|C|568
6ZXE|1|2|A|569
*
6ZXE|1|2|U|581
6ZXE|1|2|U|582
6ZXE|1|2|A|583
6ZXE|1|2|A|584
Current chains
- Chain 2
- pre-18S ribosomal RNA
Nearby chains
- Chain J
- 40S ribosomal protein S9
- Chain Y
- 40S ribosomal protein S24
Coloring options: