3D structure

PDB id
7A5F (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs
Experimental method
ELECTRON MICROSCOPY
Resolution
4.4 Å

Loop

Sequence
CUU*ACUG
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7A5F_014 not in the Motif Atlas
Geometric match to IL_8P9A_292
Geometric discrepancy: 0.3806
The information below is about IL_8P9A_292
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_15698.5
Basepair signature
cWW-L-R-L-cWW
Number of instances in this motif group
11

Unit IDs

7A5F|1|A3|C|2046
7A5F|1|A3|U|2047
7A5F|1|A3|U|2048
*
7A5F|1|A3|A|2091
7A5F|1|A3|C|2092
7A5F|1|A3|U|2093
7A5F|1|A3|G|2094

Current chains

Chain A3
16S rRNA

Nearby chains

Chain 33
39S ribosomal protein L35, mitochondrial
Chain 63
39S ribosomal protein L38, mitochondrial
Chain M3
39S ribosomal protein L15, mitochondrial
Chain g3
39S ribosomal protein L49, mitochondrial
Chain i3
39S ribosomal protein L51, mitochondrial

Coloring options:


Copyright 2026 BGSU RNA group. Page generated in 0.2205 s