IL_7A5F_091

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

CGAUAG*UCGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5F_091 not in the Motif Atlas

Geometric match to IL_4LFB_055

Geometric discrepancy: 0.3416

The information below is about IL_4LFB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_57885.1

Basepair signature

cWW-tSH-tSH-tHS-cWW-cWW

Number of instances in this motif group

8

Unit IDs

7A5F|1|A6|C|1392
7A5F|1|A6|G|1393
7A5F|1|A6|A|1394
7A5F|1|A6|U|1395
7A5F|1|A6|A|1396
7A5F|1|A6|G|1397
*
7A5F|1|A6|U|1417
7A5F|1|A6|C|1418
7A5F|1|A6|G|1419
7A5F|1|A6|A|1420
7A5F|1|A6|A|1421
7A5F|1|A6|G|1422

Current chains

Chain A6

12S rRNA

Nearby chains

Chain X6

28S ribosomal protein S29, mitochondrial

Chain f3

39S ribosomal protein L48, mitochondrial