IL_7A5F_092

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

CCG*CAUG

Length

7 nucleotides

Bulged bases

7A5F|1|A6|C|1488, 7A5F|1|A6|U|1572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5F_092 not in the Motif Atlas

Geometric match to IL_5J7L_058

Geometric discrepancy: 0.1005

The information below is about IL_5J7L_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

7A5F|1|A6|C|1487
7A5F|1|A6|C|1488
7A5F|1|A6|G|1489
*
7A5F|1|A6|C|1570
7A5F|1|A6|A|1571
7A5F|1|A6|U|1572
7A5F|1|A6|G|1573

Current chains

Chain A6

12S rRNA

Nearby chains

Chain 24

Transfer RNA; tRNA

Chain d6

Aurora kinase A-interacting protein

Chain i4

mRNA