IL_7A5F_097

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

ACUU*AUUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5F_097 not in the Motif Atlas

Geometric match to IL_2PN3_004

Geometric discrepancy: 0.1739

The information below is about IL_2PN3_004

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71194.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

29

Unit IDs

7A5F|1|A6|A|1511
7A5F|1|A6|C|1512
7A5F|1|A6|U|1513
7A5F|1|A6|U|1514
*
7A5F|1|A6|A|1544
7A5F|1|A6|U|1545
7A5F|1|A6|U|1546
7A5F|1|A6|U|1547

Current chains

Chain A6

12S rRNA

Nearby chains

Chain L3

39S ribosomal protein L14, mitochondrial

Chain a6

28S ribosomal protein S34, mitochondrial

Chain d6

Aurora kinase A-interacting protein