IL_7A5F_117

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

UAU*AA

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5F_117 not in the Motif Atlas

Geometric match to IL_7A0S_003

Geometric discrepancy: 0.3106

The information below is about IL_7A0S_003

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_34520.1

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

58

Unit IDs

7A5F|1|A3|U|2744
7A5F|1|A3|A|2745
7A5F|1|A3|U|2746
*
7A5F|1|A3|A|2802
7A5F|1|A3|A|2803

Current chains

Chain A3

16S rRNA

Nearby chains

Chain C

Transfer RNA; tRNA

Chain X3

39S ribosomal protein L28, mitochondrial