IL_7A5K_067
3D structure
- PDB id
- 7A5K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitoribosome in the post translocation state bound to mtEF-G1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUGCCAG*CGGUCACAC
- Length
- 16 nucleotides
- Bulged bases
- 7A5K|1|A6|C|908, 7A5K|1|A6|C|910
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7A5K_067 not in the Motif Atlas
- Geometric match to IL_4V88_415
- Geometric discrepancy: 0.1448
- The information below is about IL_4V88_415
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7A5K|1|A6|G|891
7A5K|1|A6|U|892
7A5K|1|A6|G|893
7A5K|1|A6|C|894
7A5K|1|A6|C|895
7A5K|1|A6|A|896
7A5K|1|A6|G|897
*
7A5K|1|A6|C|904
7A5K|1|A6|G|905
7A5K|1|A6|G|906
7A5K|1|A6|U|907
7A5K|1|A6|C|908
7A5K|1|A6|A|909
7A5K|1|A6|C|910
7A5K|1|A6|A|911
7A5K|1|A6|C|912
Current chains
- Chain A6
- 12S rRNA
Nearby chains
- Chain D6
- 28S ribosomal protein S5, mitochondrial
- Chain J6
- 28S ribosomal protein S12, mitochondrial
- Chain Z6
- 28S ribosomal protein S33, mitochondrial
- Chain r1
- Elongation factor G, mitochondrial
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