IL_7ACJ_060

3D structure

PDB id

7ACJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAGAAC*GAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ACJ_060 not in the Motif Atlas

Homologous match to IL_7A0S_059

Geometric discrepancy: 0.1178

The information below is about IL_7A0S_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_12566.4

Basepair signature

cWW-L-tHS-L-cWW-L

Number of instances in this motif group

5

Unit IDs

7ACJ|1|1|G|1651
7ACJ|1|1|A|1652
7ACJ|1|1|G|1653
7ACJ|1|1|A|1654
7ACJ|1|1|A|1655
7ACJ|1|1|C|1656
*
7ACJ|1|1|G|2004
7ACJ|1|1|A|2005
7ACJ|1|1|C|2006

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L3

Chain N

50S ribosomal protein L17