3D structure

PDB id
7ACJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of translocated trans-translation complex on E. coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
ACUAGG*CUGU
Length
10 nucleotides
Bulged bases
7ACJ|1|1|G|1992
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ACJ_063 not in the Motif Atlas
Geometric match to IL_4WF9_065
Geometric discrepancy: 0.2092
The information below is about IL_4WF9_065
Detailed Annotation
Intercalated tWH
Broad Annotation
Intercalated tWH
Motif group
IL_76758.2
Basepair signature
cWW-L-R-L-cWW-L-L
Number of instances in this motif group
7

Unit IDs

7ACJ|1|1|A|1669
7ACJ|1|1|C|1670
7ACJ|1|1|U|1671
7ACJ|1|1|A|1672
7ACJ|1|1|G|1673
7ACJ|1|1|G|1674
*
7ACJ|1|1|C|1990
7ACJ|1|1|U|1991
7ACJ|1|1|G|1992
7ACJ|1|1|U|1993

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L3
Chain K
50S ribosomal protein L14

Coloring options:


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