IL_7ACJ_165
3D structure
- PDB id
- 7ACJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of translocated trans-translation complex on E. coli stalled ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGU(5MC)AC*GAAGUCG
- Length
- 13 nucleotides
- Bulged bases
- 7ACJ|1|2|A|1493
- QA status
- Modified nucleotides: 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ACJ_165 not in the Motif Atlas
- Homologous match to IL_6CZR_369
- Geometric discrepancy: 0.5462
- The information below is about IL_6CZR_369
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_71294.1
- Basepair signature
- cWW-cWW-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
7ACJ|1|2|C|1404
7ACJ|1|2|G|1405
7ACJ|1|2|U|1406
7ACJ|1|2|5MC|1407
7ACJ|1|2|A|1408
7ACJ|1|2|C|1409
*
7ACJ|1|2|G|1491
7ACJ|1|2|A|1492
7ACJ|1|2|A|1493
7ACJ|1|2|G|1494
7ACJ|1|2|U|1495
7ACJ|1|2|C|1496
7ACJ|1|2|G|1497
Current chains
- Chain 2
- 16S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 4
- Transfer-messenger RNA; tmRNA
- Chain 5
- SsrA-binding protein
- Chain q
- 30S ribosomal protein S12
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