IL_7ACJ_199

3D structure

PDB id

7ACJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ACJ_199 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.1688

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

7ACJ|1|1|U|1851
7ACJ|1|1|U|1852
7ACJ|1|1|A|1853
7ACJ|1|1|A|1854
7ACJ|1|1|U|1855
7ACJ|1|1|U|1856
7ACJ|1|1|G|1857
7ACJ|1|1|A|1858
7ACJ|1|1|U|1859
7ACJ|1|1|G|1860
*
7ACJ|1|1|U|1882
7ACJ|1|1|U|1883
7ACJ|1|1|G|1884
7ACJ|1|1|A|1885
7ACJ|1|1|U|1886
7ACJ|1|1|C|1887
7ACJ|1|1|G|1888
7ACJ|1|1|A|1889
7ACJ|1|1|A|1890
7ACJ|1|1|G|1891

Current chains

Chain 1

23S ribosomal RNA

Nearby chains