IL_7ACR_072

3D structure

PDB id

7ACR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of post-translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

UUAGC*GCGAAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ACR_072 not in the Motif Atlas

Geometric match to IL_8GLP_051

Geometric discrepancy: 0.3463

The information below is about IL_8GLP_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47352.1

Basepair signature

cWW-cWW-L-R-tHS-L-cWW

Number of instances in this motif group

4

Unit IDs

7ACR|1|1|U|1864
7ACR|1|1|U|1865
7ACR|1|1|A|1866
7ACR|1|1|G|1867
7ACR|1|1|C|1868
*
7ACR|1|1|G|1873
7ACR|1|1|C|1874
7ACR|1|1|G|1875
7ACR|1|1|A|1876
7ACR|1|1|A|1877
7ACR|1|1|G|1878

Current chains

Chain 1

23S ribosomal RNA

Nearby chains