IL_7ACR_140

3D structure

PDB id

7ACR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of post-translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

UGUAG*CGUAGAGA

Length

13 nucleotides

Bulged bases

7ACR|1|2|A|702

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ACR_140 not in the Motif Atlas

Homologous match to IL_5J7L_035

Geometric discrepancy: 0.1808

The information below is about IL_5J7L_035

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_01488.3

Basepair signature

cWW-tSS-tSH-L-R-tHS-L-cWW

Number of instances in this motif group

10

Unit IDs

7ACR|1|2|U|684
7ACR|1|2|G|685
7ACR|1|2|U|686
7ACR|1|2|A|687
7ACR|1|2|G|688
*
7ACR|1|2|C|699
7ACR|1|2|G|700
7ACR|1|2|U|701
7ACR|1|2|A|702
7ACR|1|2|G|703
7ACR|1|2|A|704
7ACR|1|2|G|705
7ACR|1|2|A|706

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain p

30S ribosomal protein S11