IL_7ACR_161

3D structure

PDB id

7ACR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of post-translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

GAAG*CGGACC

Length

10 nucleotides

Bulged bases

7ACR|1|2|A|1257, 7ACR|1|2|A|1280, 7ACR|1|2|C|1281

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ACR_161 not in the Motif Atlas

Homologous match to IL_6CZR_161

Geometric discrepancy: 0.3094

The information below is about IL_6CZR_161

Detailed Annotation

180 degree turn

Broad Annotation

No text annotation

Motif group

IL_11344.1

Basepair signature

cWW-cSS-L-R-cWW

Number of instances in this motif group

3

Unit IDs

7ACR|1|2|G|1255
7ACR|1|2|A|1256
7ACR|1|2|A|1257
7ACR|1|2|G|1258
*
7ACR|1|2|C|1277
7ACR|1|2|G|1278
7ACR|1|2|G|1279
7ACR|1|2|A|1280
7ACR|1|2|C|1281
7ACR|1|2|C|1282

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain h

30S ribosomal protein S3

Chain o

30S ribosomal protein S10

Chain s

30S ribosomal protein S14