3D structure

PDB id
7ACR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of post-translocated trans-translation complex on E. coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.44 Å

Loop

Sequence
GGUUC*GGCC
Length
9 nucleotides
Bulged bases
7ACR|1|1|U|2402
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ACR_191 not in the Motif Atlas
Geometric match to IL_1GID_008
Geometric discrepancy: 0.2856
The information below is about IL_1GID_008
Detailed Annotation
Tandem non-canonical cWW pairs
Broad Annotation
No text annotation
Motif group
IL_85033.1
Basepair signature
cWW-cWW-cWW-cWW
Number of instances in this motif group
36

Unit IDs

7ACR|1|1|G|2399
7ACR|1|1|G|2400
7ACR|1|1|U|2401
7ACR|1|1|U|2402
7ACR|1|1|C|2403
*
7ACR|1|1|G|2414
7ACR|1|1|G|2415
7ACR|1|1|C|2416
7ACR|1|1|C|2417

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain L
50S ribosomal protein L15
Chain c
50S ribosomal protein L33
Chain e
50S ribosomal protein L35

Coloring options:


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