IL_7ACR_197

3D structure

PDB id

7ACR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of post-translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

GUCGAA*UGGC

Length

10 nucleotides

Bulged bases

7ACR|1|2|G|64, 7ACR|1|2|A|65

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ACR_197 not in the Motif Atlas

Geometric match to IL_1GID_008

Geometric discrepancy: 0.3502

The information below is about IL_1GID_008

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

36

Unit IDs

7ACR|1|2|G|61
7ACR|1|2|U|62
7ACR|1|2|C|63
7ACR|1|2|G|64
7ACR|1|2|A|65
7ACR|1|2|A|66
*
7ACR|1|2|U|103
7ACR|1|2|G|104
7ACR|1|2|G|105
7ACR|1|2|C|106

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain y

30S ribosomal protein S20