IL_7AFH_001
3D structure
- PDB id
- 7AFH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacterial 30S ribosomal subunit assembly complex state C (head domain)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.59 Å
Loop
- Sequence
- GCAC*GUUCCC
- Length
- 10 nucleotides
- Bulged bases
- 7AFH|1|1|C|934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AFH_001 not in the Motif Atlas
- Geometric match to IL_6CZR_149
- Geometric discrepancy: 0.2503
- The information below is about IL_6CZR_149
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93211.1
- Basepair signature
- cWW-cWS-cWW-L-R-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7AFH|1|1|G|933
7AFH|1|1|C|934
7AFH|1|1|A|935
7AFH|1|1|C|936
*
7AFH|1|1|G|1379
7AFH|1|1|U|1380
7AFH|1|1|U|1381
7AFH|1|1|C|1382
7AFH|1|1|C|1383
7AFH|1|1|C|1384
Current chains
- Chain 1
- 16SrRNA (head domain of the 30S ribosome)
Nearby chains
- Chain G
- 30S ribosomal protein S7
- Chain I
- 30S ribosomal protein S9
Coloring options: