IL_7AJU_002
3D structure
- PDB id
- 7AJU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UUGGU*ACUGA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AJU_002 not in the Motif Atlas
- Geometric match to IL_5TBW_121
- Geometric discrepancy: 0.3214
- The information below is about IL_5TBW_121
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
7AJU|1|D2|U|285
7AJU|1|D2|U|286
7AJU|1|D2|G|287
7AJU|1|D2|G|288
7AJU|1|D2|U|289
*
7AJU|1|D4|A|64
7AJU|1|D4|C|65
7AJU|1|D4|U|66
7AJU|1|D4|G|67
7AJU|1|D4|A|68
Current chains
- Chain D2
- 5'ETS RNA
- Chain D4
- U3 snoRNA
Nearby chains
- Chain CE
- Nucleolar protein 58
- Chain UJ
- U3 small nucleolar RNA-associated protein 10
- Chain UU
- U3 small nucleolar RNA-associated protein 21
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