IL_7AQD_107
3D structure
- PDB id
- 7AQD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the bacterial RQC complex (Translocating State)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUGAG*CAAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 7AQD|1|A|G|2809
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AQD_107 not in the Motif Atlas
- Homologous match to IL_7A0S_093
- Geometric discrepancy: 0.1027
- The information below is about IL_7A0S_093
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.4
- Basepair signature
- cWW-tSH-tHW-tHS-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
7AQD|1|A|U|2665
7AQD|1|A|U|2666
7AQD|1|A|G|2667
7AQD|1|A|A|2668
7AQD|1|A|G|2669
*
7AQD|1|A|C|2803
7AQD|1|A|A|2804
7AQD|1|A|A|2805
7AQD|1|A|G|2806
7AQD|1|A|A|2807
7AQD|1|A|U|2808
7AQD|1|A|G|2809
7AQD|1|A|A|2810
7AQD|1|A|G|2811
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain J
- 50S ribosomal protein L13
Coloring options: