IL_7ASN_017

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

UUAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASN_017 not in the Motif Atlas

Homologous match to IL_4WF9_019

Geometric discrepancy: 0.151

The information below is about IL_4WF9_019

Detailed Annotation

AAA cross-strand stack

Broad Annotation

AAA cross-strand stack

Motif group

IL_66798.3

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

7

Unit IDs

7ASN|1|A|U|649
7ASN|1|A|U|650
7ASN|1|A|A|651
7ASN|1|A|A|652
7ASN|1|A|G|653
*
7ASN|1|A|U|663
7ASN|1|A|G|664
7ASN|1|A|G|665
7ASN|1|A|A|666
7ASN|1|A|G|667

Current chains

Chain A

23S

Nearby chains

Chain E

50S ribosomal protein L4

Chain L

50S ribosomal protein L15