IL_7ASN_032

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

AUAU*AUU

Length

7 nucleotides

Bulged bases

7ASN|1|A|U|1056

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASN_032 not in the Motif Atlas

Geometric match to IL_5F5F_003

Geometric discrepancy: 0.1831

The information below is about IL_5F5F_003

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10892.3

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

61

Unit IDs

7ASN|1|A|A|1055
7ASN|1|A|U|1056
7ASN|1|A|A|1057
7ASN|1|A|U|1058
*
7ASN|1|A|A|1192
7ASN|1|A|U|1193
7ASN|1|A|U|1194

Current chains

Chain A

23S

Nearby chains

Chain H

50S ribosomal protein L13

Chain O

50S ribosomal protein L20