IL_7ASN_051

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

7ASN|1|A|G|1743

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASN_051 not in the Motif Atlas

Homologous match to IL_4WF9_066

Geometric discrepancy: 0.4752

The information below is about IL_4WF9_066

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_20700.2

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

11

Unit IDs

7ASN|1|A|C|1730
7ASN|1|A|G|1731
7ASN|1|A|U|1732
7ASN|1|A|A|1733
7ASN|1|A|A|1734
7ASN|1|A|C|1735
*
7ASN|1|A|G|1740
7ASN|1|A|G|1741
7ASN|1|A|A|1742
7ASN|1|A|G|1743
7ASN|1|A|A|1744
7ASN|1|A|A|1745
7ASN|1|A|G|1746

Current chains

Chain A

23S

Nearby chains

Chain F

50S ribosomal protein L2