IL_7ASN_082

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

CAGUU*GCUGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASN_082 not in the Motif Atlas

Geometric match to IL_5TBW_121

Geometric discrepancy: 0.2519

The information below is about IL_5TBW_121

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05145.3

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

13

Unit IDs

7ASN|1|A|C|2719
7ASN|1|A|A|2720
7ASN|1|A|G|2721
7ASN|1|A|U|2722
7ASN|1|A|U|2723
*
7ASN|1|A|G|2741
7ASN|1|A|C|2742
7ASN|1|A|U|2743
7ASN|1|A|G|2744
7ASN|1|A|G|2745

Current chains

Chain A

23S

Nearby chains

Chain N

50S ribosomal protein L19