IL_7ASN_083

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

UGUC*GCAUAG

Length

10 nucleotides

Bulged bases

7ASN|1|A|U|2739, 7ASN|1|A|A|2740

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASN_083 not in the Motif Atlas

Geometric match to IL_4K27_002

Geometric discrepancy: 0.3437

The information below is about IL_4K27_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71194.3

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

41

Unit IDs

7ASN|1|A|U|2723
7ASN|1|A|G|2724
7ASN|1|A|U|2725
7ASN|1|A|C|2726
*
7ASN|1|A|G|2736
7ASN|1|A|C|2737
7ASN|1|A|A|2738
7ASN|1|A|U|2739
7ASN|1|A|A|2740
7ASN|1|A|G|2741

Current chains

Chain A

23S

Nearby chains

Chain N

50S ribosomal protein L19