IL_7ASN_085

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

CCC*GAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASN_085 not in the Motif Atlas

Geometric match to IL_1Y27_001

Geometric discrepancy: 0.1353

The information below is about IL_1Y27_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.5

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

238

Unit IDs

7ASN|1|A|C|2834
7ASN|1|A|C|2835
7ASN|1|A|C|2836
*
7ASN|1|A|G|2848
7ASN|1|A|A|2849
7ASN|1|A|G|2850

Current chains

Chain A

23S

Nearby chains

Chain D

50S ribosomal protein L3

Chain b

50S ribosomal protein L32