IL_7ASN_092

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

UCG*CCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASN_092 not in the Motif Atlas

Geometric match to IL_4WF9_018

Geometric discrepancy: 0.1867

The information below is about IL_4WF9_018

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_71625.4

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

95

Unit IDs

7ASN|1|B|U|78
7ASN|1|B|C|79
7ASN|1|B|G|80
*
7ASN|1|B|C|91
7ASN|1|B|C|92
7ASN|1|B|G|93

Current chains

Chain B

5S

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain T

50S ribosomal protein L25

Chain X

50S ribosomal protein L30

Chain Y

50S ribosomal protein L16