IL_7ASO_029

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

UAAG*CUUA

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASO_029 not in the Motif Atlas

Geometric match to IL_1L9A_005

Geometric discrepancy: 0.2971

The information below is about IL_1L9A_005

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

7ASO|1|Y|U|4
7ASO|1|Y|A|5
7ASO|1|Y|A|6
7ASO|1|Y|G|7
*
7ASO|1|Y|C|2915
7ASO|1|Y|U|2916
7ASO|1|Y|U|2917
7ASO|1|Y|A|2918

Current chains

Chain Y

23S

Nearby chains

Chain M

50S ribosomal protein L13